中文版 | English
KIZ OpenIR  > 科研部门  > 生态学与环境保护中心（俞维理）
Exploiting sparseness in de novo genome assembly
Ye CX*1,2,3; Ma ZS4; Cannon CH5,6; Pop M*3; Yu DW[*]2,7; cxy@umd.edu; mpop@umiacs.umd.edu; douglas.yu@uea.ac.uk
2012
发表期刊BMC BIOINFORMATICS
卷号13期号:Suppl 6页码:S1
摘要Background: The very large memory requirements for the construction of assembly graphs for de novo genome assembly limit current algorithms to super-computing environments. 

Methods: In this paper, we demonstrate that constructing a sparse assembly graph which stores only a small fraction of the observed k-mers as nodes and the links between these nodes allows the de novo assembly of even moderately-sized genomes (similar to 500 M) on a typical laptop computer. 

Results: We implement this sparse graph concept in a proof-of-principle software package, SparseAssembler, utilizing a new sparse k-mer graph structure evolved from the de Bruijn graph. We test our SparseAssembler with both simulated and real data, achieving similar to 90% memory savings and retaining high assembly accuracy, without sacrificing speed in comparison to existing de novo assemblers.
资助者This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6.
收录类别SCI
语种英语
资助者This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6. ; This work was supported in part by Yunnan Province, China [20080A001], and the Chinese Academy of Sciences [0902281081, KSCX2-YW-Z-1027, Y002731079], and also by the US National Science Foundation grant IIS-0812111. This article has been published as part of BMC Bioinformatics Volume 13 Supplement 6, 2012: Proceedings of the Second Annual RECOMB Satellite Workshop on Massively Parallel Sequencing (RECOMB-seq 2012). The full contents of the supplement are available online at http://www. biomedcentral.com/bmcbioinformatics/supplements/13/S6.
文献类型期刊论文
条目标识符http://ir.kiz.ac.cn/handle/152453/10815
专题科研部门_生态学与环境保护中心（俞维理）
遗传资源与进化国家重点实验室
科研部门_计算生物与医学生态学（马占山）
通讯作者cxy@umd.edu; mpop@umiacs.umd.edu; douglas.yu@uea.ac.uk
作者单位1.Ecology & Evolution of Plant-Animal Interaction Group, Xishuangbanna Tropical Botanic Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303 China
2.Ecology, Conservation, and Environment Center; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223 China
3.Department of Computer Science and Center for Bioinformatics and Computational Biology, Institute for Advanced Computer Studies, University of Maryland, College Park, MD, USA
4.Computational Biology and Medical Ecology Lab; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223 China
5.Ecological Evolution Group, Xishuangbanna Tropical Botanic Garden, Chinese Academy of Sciences, Menglun, Yunnan 666303 China
6.Department of Biological Sciences, Texas Tech University, Lubbock, TX 79410 USA.
7.School of Biological Sciences, University of East Anglia, Norwich, Norfolk NR47TJ UK
推荐引用方式
GB/T 7714		 Ye CX*,Ma ZS,Cannon CH,et al. Exploiting sparseness in de novo genome assembly[J]. BMC BIOINFORMATICS,2012,13(Suppl 6):S1.
APA Ye CX*.,Ma ZS.,Cannon CH.,Pop M*.,Yu DW[*].,...&douglas.yu@uea.ac.uk.(2012).Exploiting sparseness in de novo genome assembly.BMC BIOINFORMATICS,13(Suppl 6),S1.
MLA Ye CX*,et al."Exploiting sparseness in de novo genome assembly".BMC BIOINFORMATICS 13.Suppl 6(2012):S1.
条目包含的文件
文件名称/大小 文献类型 版本类型 开放类型 使用许可
2012091315.pdf（528KB）期刊论文出版稿开放获取CC BY-NC-SA请求全文
个性服务
推荐该条目
保存到收藏夹
查看访问统计
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Ye CX*]的文章
[Ma ZS]的文章
[Cannon CH]的文章
百度学术
百度学术中相似的文章
[Ye CX*]的文章
[Ma ZS]的文章
[Cannon CH]的文章
必应学术
必应学术中相似的文章
[Ye CX*]的文章
[Ma ZS]的文章
[Cannon CH]的文章
相关权益政策
暂无数据
收藏/分享
所有评论 (0)
暂无评论
 

除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。