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Genetic association and meta-analysis of a schizophrenia GWAS variant rs10489202 in East Asian populations
Yongfeng Yang1,2; Luxian Lv1,2; Lingyi Li3; Wenqiang Li1,2; Yan Zhang1,2; Hong Chang3; Xiao Xiao3; Ming Li3,4
2018
发表期刊Translational Psychiatry
卷号8期号:1页码:144
摘要

Previous genome-wide association studies (GWAS) suggest that rs10489202 in the intron of MPC2 (mitochondrialpyruvate carrier 2) is a risk locus for schizophrenia in Han Chinese populations. To validate this discovery, weconducted a replication analysis in an independent case-control sample of Han Chinese ancestry (437 cases and 2031controls), followed by a meta-analytic investigation in multiple East Asian samples. In the replication analysis,rs10489202 showed marginal association with schizophrenia (two-tailed P= 0.071, OR=1.192 for T allele); in themeta-analysis using a total of 14,340 cases and 20,349 controls from ten East Asian samples, rs10489202 was genome-wide significantly associated with schizophrenia (two-tailed P=3.39×10 –10 , OR= 1.161 for T allele, under the fixed-effect model). We then performed an explorative investigation of the association between this SNP and bipolardisorder, as well as a major depressive disorder, and the schizophrenia-predisposing allele was associated with anincreased risk of major depressive disorder in East Asians (two-tailed P=2.49×10 –2 , OR= 1.103 for T allele).Furthermore, expression quantitative trait loci (eQTL) analysis in lymphoblastoid cell lines from East Asian donors (N=85 subjects) revealed that rs10489202 was specifically and significantly associated with the expression of TIPRL gene(P =5.67 × 10 –4 ). Taken together, our data add further support for the genetic involvement of this genomic locus inthe susceptibility to schizophrenia in East Asian populations, and also provide preliminary evidence for the underlyingmolecular mechanisms.

DOI10.1038/s41398-018-0211-x
收录类别其他
语种英语
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被引频次:4[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.kiz.ac.cn/handle/152453/12378
专题科研部门_转化基因组(李 明)
通讯作者Ming Li
作者单位1.Department of Psychiatry, Henan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, Xinxiang, Henan, China
2.Henan Key Lab of Biological Psychiatry, Xinxiang Medical University, Xinxiang, Henan, China.
3.Key Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Kunming, Yunnan, China
4.Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai, China
推荐引用方式
GB/T 7714
Yongfeng Yang,Luxian Lv,Lingyi Li,et al. Genetic association and meta-analysis of a schizophrenia GWAS variant rs10489202 in East Asian populations[J]. Translational Psychiatry,2018,8(1):144.
APA Yongfeng Yang.,Luxian Lv.,Lingyi Li.,Wenqiang Li.,Yan Zhang.,...&Ming Li.(2018).Genetic association and meta-analysis of a schizophrenia GWAS variant rs10489202 in East Asian populations.Translational Psychiatry,8(1),144.
MLA Yongfeng Yang,et al."Genetic association and meta-analysis of a schizophrenia GWAS variant rs10489202 in East Asian populations".Translational Psychiatry 8.1(2018):144.
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