| Identification of protein superfamily from structure-based sequence motif | |
| Huang JF*; Liu CQ; jfhuang@pulic.km.yn.cn | |
| 2002 | |
| 发表期刊 | CHINESE SCIENCE BULLETIN
 |
| ISSN | 1001-6538 |
| 卷号 | 47期号:16页码:1377-1381 |
| 合作性质 | 其它 |
| 摘要 | The structure-based sequence motif of the distant proteins in evolution, protein tyrosine phosphatases (PTP) I and II superfamilies, as an example, has been defined by the structural comparison, structure-based sequence alignment and analyses on substitution patterns of residues in common sequence conserved regions. And the phosphatases I and II can be correctly identified together by the structure-based PTP sequence motif from SWISS-PROT and TrEBML databases. The results show that the correct rates of identification are over 98%. This is the first time to identify PTP I and II together by this motif. |
| 关键词 | Protein Tyrosine Phosphatases Sequence Motif Sequence Identification Of Superfamily Hypothetical Proteins Molecular Evolution |
| 资助者 | This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). ; This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). ; This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). ; This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). |
| URL | 查看原文 |
| 收录类别 | SCI |
| 语种 | 英语 |
| 资助者 | This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). ; This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). ; This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). ; This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M). |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.kiz.ac.cn/handle/152453/4893 |
| 专题 | 结构生物信息学 细胞与分子进化重点实验室 |
| 通讯作者 | jfhuang@pulic.km.yn.cn |
| 作者单位 | Key Laboratory of Cellular and Molecular Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China |
| 推荐引用方式 GB/T 7714 | Huang JF*,Liu CQ,jfhuang@pulic.km.yn.cn. Identification of protein superfamily from structure-based sequence motif[J]. CHINESE SCIENCE BULLETIN,2002,47(16):1377-1381. |
| APA | Huang JF*,Liu CQ,&jfhuang@pulic.km.yn.cn.(2002).Identification of protein superfamily from structure-based sequence motif.CHINESE SCIENCE BULLETIN,47(16),1377-1381. |
| MLA | Huang JF*,et al."Identification of protein superfamily from structure-based sequence motif".CHINESE SCIENCE BULLETIN 47.16(2002):1377-1381. |
| 条目包含的文件 | ||||||
| 文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
| 2016110802.pdf（382KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | 请求全文 | |
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。
修改评论