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Identification of constrained sequence elements across 239 primate genomes 期刊论文
NATURE, 2024, 卷号: 625, 期号: 7996
作者:  Kuderna, LFK;  Ulirsch, JC;  Rashid, S;  Ameen, M;  Sundaram, L;  Hickey, G;  Cox, AJ;  Gao, H;  Kumar, A;  Aguet, F;  Christmas, MJ;  Clawson, H;  Haeussler, M;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rouselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, D;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Karakikes, I;  Wang, KC;  Umapathy, G;  Roos, C;  Boubli, JP;  Siepel, A;  Kundaje, A;  Paten, B;  Lindblad-Toh, K;  Rogers, J;  Bonet, TM;  Farh, KKH
Adobe PDF(11749Kb)  |  收藏  |  浏览/下载：20/0  |  提交时间：2025/04/09
The landscape of tolerated genetic variation in humans and primates 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 929+
作者:  Gao, H;  Hamp, T;  Ede, J;  Schraiber, JG;  McRae, J;  Singer-Berk, M;  Yang, YS;  Dietrich, ASD;  Fiziev, PP;  Kuderna, LFK;  Sundaram, L;  Wu, YB;  Adhikari, A;  Field, Y;  Chen, C;  Batzoglou, S;  Aguet, F;  Lemire, G;  Reimers, R;  Balick, D;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  do Amaral, JV;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Bataillon, T;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, A;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Lek, M;  Sunyaev, S;  O'Donnell-Luria, A;  Rehm, HL;  Xu, JB;  Rogers, J;  Marques-Bonet, T;  Farh, KKH
Adobe PDF(6295Kb)  |  收藏  |  浏览/下载：687/0  |  提交时间：2024/06/21
A global catalog of whole-genome diversity from 233 primate species 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 906-912
作者:  Kuderna, LFK;  Gao, H;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, PT;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(3340Kb)  |  收藏  |  浏览/下载：42/0  |  提交时间：2024/06/21
Dense sampling of bird diversity increases power of comparative genomics 期刊论文
NATURE, 2020, 卷号: 587, 期号: 7833, 页码: 252
作者:  Feng, Shaohong;  Stiller, Josefin;  Deng, Yuan;  Armstrong, Joel;  Fang, Qi;  Reeve, Andrew Hart;  Xie, Duo;  Chen, Guangji;  Guo, Chunxue;  Faircloth, Brant C.;  Petersen, Bent;  Wang, Zongji;  Zhou, Qi;  Diekhans, Mark;  Chen, Wanjun;  Andreu-Sanchez, Sergio;  Margaryan, Ashot;  Howard, Jason Travis;  Parent, Carole;  Pacheco, George;  Sinding, Mikkel-Holger S.;  Puetz, Lara;  Cavill, Emily;  Ribeiro, Angela M.;  Eckhart, Leopold;  Fjeldsa, Jon;  Hosner, Peter A.;  Brumfield, Robb T.;  Christidis, Les;  Bertelsen, Mads F.;  Sicheritz-Ponten, Thomas;  Tietze, Dieter Thomas;  Robertson, Bruce C.;  Song, Gang;  Borgia, Gerald;  Claramunt, Santiago;  Lovette, Irby J.;  Cowen, Saul J.;  Njoroge, Peter;  Dumbacher, John Philip;  Ryder, Oliver A.;  Fuchs, Jerome;  Bunce, Michael;  Burt, David W.;  Cracraft, Joel;  Meng, Guanliang;  Hackett, Shannon J.;  Ryan, Peter G.;  Jonsson, Knud Andreas;  Jamieson, Ian G.;  da Fonseca, Rute R.;  Braun, Edward L.;  Houde, Peter;  Mirarab, Siavash;  Suh, Alexander;  Hansson, Bengt;  Ponnikas, Suvi;  Sigeman, Hanna;  Stervander, Martin;  Frandsen, Paul B.;  van der Zwan, Henriette;  van der Sluis, Rencia;  Visser, Carina;  Balakrishnan, Christopher N.;  Clark, Andrew G.;  Fitzpatrick, John W.;  Bowman, Reed;  Chen, Nancy;  Cloutier, Alison;  Sackton, Timothy B.;  Edwards, Scott V.;  Foote, Dustin J.;  Shakya, Subir B.;  Sheldon, Frederick H.;  Vignal, Alain;  Soares, Andre E. R.;  Shapiro, Beth;  Gonzalez-Solis, Jacob;  Ferrer-Obiol, Joan;  Rozas, Julio;  Riutort, Marta;  Tigano, Anna;  Friesen, Vicki;  Dalen, Love;  Urrutia, Araxi O.;  Szekely, Tamas;  Liu, Yang;  Campana, Michael G.;  Corvelo, Andre;  Fleischer, Robert C.;  Rutherford, Kim M.;  Gemmell, Neil J.;  Dussex, Nicolas;  Mouritsen, Henrik;  Thiele, Nadine;  Delmore, Kira;  Liedvogel, Miriam;  Franke, Andre;  Hoeppner, Marc P.;  Krone, Oliver;  Fudickar, Adam M.;  Mila, Borja;  Ketterson, Ellen D.;  Fidler, Andrew Eric;  Friis, Guillermo;  Parody-Merino, Angela M.;  Battley, Phil F.;  Cox, Murray P.;  Lima, Nicholas Costa Barroso;  Prosdocimi, Francisco;  Parchman, Thomas Lee;  Schlinger, Barney A.;  Loiselle, Bette A.;  Blake, John G.;  Lim, Haw Chuan;  Day, Lainy B.;  Fuxjager, Matthew J.;  Baldwin, Maude W.;  Braun, Michael J.;  Wirthlin, Morgan;  Dikow, Rebecca B.;  Ryder, T. Brandt;  Camenisch, Glauco;  Keller, Lukas F.;  DaCosta, Jeffrey M.;  Hauber, Mark E.;  Louder, Matthew I. M.;  Witt, Christopher C.;  McGuire, Jimmy A.;  Mudge, Joann;  Megna, Libby C.;  Carling, Matthew D.;  Wang, Biao;  Taylor, Scott A.;  Del-Rio, Glaucia;  Aleixo, Alexandre;  Vasconcelos, Ana Tereza Ribeiro;  Mello, Claudio V.;  Weir, Jason T.;  Haussler, David;  Li, Qiye;  Yang, Huanming;  Wang, Jian;  Lei, Fumin;  Rahbek, Carsten;  Gilbert, M. Thomas P.;  Graves, Gary R.;  Jarvis, Erich D.;  Paten, Benedict;  Zhang, Guojie
Adobe PDF(11384Kb)  |  收藏  |  浏览/下载：159/0  |  提交时间：2021/11/09