Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing

doi:10.1093/molbev/msx276

	Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing
	Lin Zeng 1,2; Dong-Dong Wu 1,2,8; Yan Li 1,5; Ya-Ping Zhang 1,2,5; Ling-Yan Su 2,6; Yan-Hua Su 7; Newton O. Otecko 1,2,8; Ambroise Dalecky 9,10; Stephen Donnellan 11; Ken Aplin 12; Xiao-Hui Liu 13; Ying Song 13; Zhi-Bin Zhang 14; AliEsmailizadeh 15; SaeedS.Sohrabi 15; HojjatAsadollahpourNanaei 15; He-QunLiu 1,2; Ming-ShanWang 1,2; Solimane Ag Atteynine 16,17; Ge ´rard Rocamora 18; Fabrice Brescia19 ; Serge Morand 20; David M. Irwin 1,21; Ming-Sheng Peng 1,2,8; Yong-Gang Yao2,6 ; Hai-Peng Li 3
	2018
发表期刊	Molecular Biology and Evolution
卷号	35 期号:1 页码:149-158
摘要	The geographic origin and migration of the brown rat (Rattus norvegicus) remain subjects of considerable debate. In thisstudy, we sequenced whole genomes of 110 wild brown rats with a diverse world-wide representation. We reveal thatbrownratsmigratedoutofsouthernEastAsia,ratherthannorthernAsiaasformerlysuggested,intotheMiddleEastandthen to Europe and Africa, thousands of years ago. Comparison of genomes from different geographical populationsreveals that many genes involved in the immune system experienced positive selection in the wild brown rat.
关键词	Rattus Norvegicus Origin Demographic History Natural Selection
DOI	10.1093/molbev/msx276
语种	英语
引用统计	被引频次：6[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.kiz.ac.cn/handle/152453/12385
专题	科研部门_进化与发育转录组学（吴东东）科研部门_分子进化与基因组多样性（张亚平）
通讯作者	Yong-Gang Yao; Hai-Peng Li
作者单位	1.State Key Laboratory of Genetic Resources and Evolution, Yunnan Laboratory of Molecular Biology of Domestic Animals, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China 2.Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, China 3.CAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China 4.Division of Mammals, National Museum of Natural History, Smithsonian Institution, Washington, DC 5.State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China 6.State Key Laboratory of Integrated Management on Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, China 7.Department of Animal Science, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman, Iran 8.Institut de Recherche pour le De ´veloppement (Ird), IMBE (UMR AMU/CNRS/IRD/UAPV), Bamako, Mali 9.Faculte ´ des Sciences et Techniques (FST), Universite ´ des Sciences, des Techniques et des Technologies de Bamako (USTTB), Bamako, Mali 10.Island Biodiversity & Conservation Center, University of Seychelles, Mahe ´, Seychelles 11.Diversite ´ Biologique et Fonctionnelle des Ecosyste `mes, Institut Agronomique ne ´o-Cale ´donien, Port Laguerre, Paita, New Caledonia 12.CNRS-CIRAD, Centre d’Infectiologie Christophe Me ´rieux du Laos, Vientiane, Lao PDR 13.Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Canada 14.University of Chinese Academy of Sciences, Beijing, China 15.State Key Laboratory for Conservation and Utilization of Bio-Resource in Yunnan, Yunnan University, Kunming, China 16.KeyLaboratoryofAnimalModelsandHumanDiseaseMechanismsoftheChineseAcademyofSciences& YunnanProvince,Kunming Institute of Zoology, Kunming, China 17.College of Animal Science and Technology, Yunnan Agricultural University, Kunming, China 18.Sino-Africa Joint Research Center, Chinese Academy of Sciences, Kunming, China 19.Institut de Recherche pour le De ´veloppement (Ird), CBGP (UMR INRA/IRD/Cirad/Montpellier SupAgro), Montferrier sur Lez cedex, France 20.Institut de Recherche pour le De ´veloppement (Ird), LPED (UMR AMU/IRD), Marseille, France 21.University of Adelaide and the South Australian Museum, Adelaide, Australia
推荐引用方式 GB/T 7714	Lin Zeng,Dong-Dong Wu,Yan Li,et al. Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing[J]. Molecular Biology and Evolution,2018,35(1):149-158.
APA	Lin Zeng.,Dong-Dong Wu.,Yan Li.,Ya-Ping Zhang.,Ling-Yan Su.,...&Hai-Peng Li.(2018).Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing.Molecular Biology and Evolution,35(1),149-158.
MLA	Lin Zeng,et al."Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing".Molecular Biology and Evolution 35.1(2018):149-158.

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