| Multiple maternal origins of chickens: Out of the Asian jungles | |
Liu YP1,3; Wu GS1,2,4; Yao YG1; Miao YW2; Luikart G5,7; Baig M6; Beja-Pereira A5,7; Ding ZL2; Palanichamy MG2; Zhang YP[*]1,2
| |
| 2006 | |
| 发表期刊 | MOLECULAR PHYLOGENETICS AND EVOLUTION
 |
| ISSN | 1055-7903 |
| 卷号 | 38期号:1页码:12-19 |
| 合作性质 | 其它 |
| 摘要 | Domestic chickens have long been important to human societies for food, religion, entertainment, and decorative uses, yet the origins and phylogeography of chickens through Eurasia remain uncertain. Here, we assessed their origins and phylogeographic history by analyzing the mitochondrial DNA hypervariable segment I (HVS-I) for 834 domestic chickens (Gallus gallus domesticus) across Eurasia as well as 66 wild red jungle fowls (Gallus gallus) from Southeast Asia and China. Phylogenetic analyses revealed nine highly divergent mtDNA clades (A-I) in which seven clades contained both the red jungle fowls and domestic chickens. There was no breed-specific clade in the chickens. The clades A, B, and E are distributed ubiquitously in Eurasia, while the other clades were restricted to South and Southeast Asia. Clade C was mainly distributed in Japan and Southeast China, while clades F and G were exclusive to Yunnan, China. The geographic distribution of clade D was closely related to the distribution of the pastime of cock fighting. Statistical tests detect population expansion within each subclade. These distinct distribution patterns and expansion signatures suggest that different clades may originate from different regions, such as Yunnan, South and Southwest China and/or surrounding areas (i.e., Vietnam, Burma, and Thailand), and the Indian subcontinent, respectively, which support the theory of multiple origins in South and Southeast Asia. |
| 关键词 | Mtdna Domestic Chicken Red Jungle Fowl Origin Phylogeography |
| 资助者 | The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). |
| URL | 查看原文 |
| 收录类别 | SCI |
| 语种 | 英语 |
| 资助者 | The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). ; The work was supported by the Natural Science Foundation of Yun- nan Province, State Key Basic Research and Development Plan (G20000161), and National Natural Science Founda- tion of China (30021004). |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.kiz.ac.cn/handle/152453/4219 |
| 专题 | 科研部门_分子进化与基因组多样性（张亚平） 科研部门_疾病机理遗传学和进化医学学科组（姚永刚） 细胞与分子进化开放实验室 |
| 作者单位 | 1.Yunnan Laboratory of Molecular Biology of Domestic Animals, and Laboratory of Cellular and Molecular Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China 2.Laboratory for Conservation and Utilization of Bio-resource, Yunnan University, Kunming 650091, China 3.College of Animal Science and Technology, Sichuan Agriculture University, Ya’an, Sichuan 625014, China 4.The Graduate School of the Chinese Academy of Sciences, Beijing 100039, China 5.Laboratoire d’Ecologie Alpine, Génomique des Populations et Biodiversité, CNRS UMR 5553, Université Joseph Fourier, BP 53, 38041 Grenoble, France 6.Department of Zoology, Government Vidarbha Institute of Science and Humanities, Amravati 444601, India 7.Centro de Investigação em Biodiversidade e Recursos Geneticos (CIBIO-UP) and SAECA, Universidade do Porto, Campus Agrario de Vairao 4485-661, Portugal |
| 推荐引用方式 GB/T 7714 | Liu YP,Wu GS,Yao YG,et al. Multiple maternal origins of chickens: Out of the Asian jungles[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2006,38(1):12-19. |
| APA | Liu YP.,Wu GS.,Yao YG.,Miao YW.,Luikart G.,...&Zhang YP[*].(2006).Multiple maternal origins of chickens: Out of the Asian jungles.MOLECULAR PHYLOGENETICS AND EVOLUTION,38(1),12-19. |
| MLA | Liu YP,et al."Multiple maternal origins of chickens: Out of the Asian jungles".MOLECULAR PHYLOGENETICS AND EVOLUTION 38.1(2006):12-19. |
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