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Identification of constrained sequence elements across 239 primate genomes 期刊论文
NATURE, 2024, 卷号: 625, 期号: 7996
作者:  Kuderna, LFK;  Ulirsch, JC;  Rashid, S;  Ameen, M;  Sundaram, L;  Hickey, G;  Cox, AJ;  Gao, H;  Kumar, A;  Aguet, F;  Christmas, MJ;  Clawson, H;  Haeussler, M;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rouselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, D;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Karakikes, I;  Wang, KC;  Umapathy, G;  Roos, C;  Boubli, JP;  Siepel, A;  Kundaje, A;  Paten, B;  Lindblad-Toh, K;  Rogers, J;  Bonet, TM;  Farh, KKH
Adobe PDF(11749Kb)  |  收藏  |  浏览/下载：31/0  |  提交时间：2025/04/09
Ecological and anthropogenic effects on the genomic diversity of lemurs in Madagascar 期刊论文
NATURE ECOLOGY & EVOLUTION, 2024, 卷号: 9, 期号: 1
作者:  Orkin, JD;  Kuderna, LFK;  Hermosilla-Albala, N;  Fontsere, C;  Aylward, ML;  Janiak, MC;  Andriaholinirina, N;  Balaresque, P;  Blair, ME;  Fausser, JL;  Gut, IG;  Gut, M;  Hahn, MW;  Harris, RA;  Horvath, JE;  Keyser, C;  Kitchener, AC;  Le, MD;  Lizano, E;  Merker, S;  Nadler, T;  Perry, GH;  Rabarivola, CJ;  Rasmussen, L;  Raveendran, M;  Roos, C;  Wu, DD;  Zaramody, A;  Zhang, GJ;  Zinner, D;  Pozzi, L;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(4976Kb)  |  收藏  |  浏览/下载：22/0  |  提交时间：2025/04/09
The landscape of tolerated genetic variation in humans and primates 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 929+
作者:  Gao, H;  Hamp, T;  Ede, J;  Schraiber, JG;  McRae, J;  Singer-Berk, M;  Yang, YS;  Dietrich, ASD;  Fiziev, PP;  Kuderna, LFK;  Sundaram, L;  Wu, YB;  Adhikari, A;  Field, Y;  Chen, C;  Batzoglou, S;  Aguet, F;  Lemire, G;  Reimers, R;  Balick, D;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  do Amaral, JV;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Bataillon, T;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, A;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Lek, M;  Sunyaev, S;  O'Donnell-Luria, A;  Rehm, HL;  Xu, JB;  Rogers, J;  Marques-Bonet, T;  Farh, KKH
Adobe PDF(6295Kb)  |  收藏  |  浏览/下载：691/0  |  提交时间：2024/06/21
Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture 期刊论文
GENOME BIOLOGY, 2023, 卷号: 24, 期号: 1
作者:  Meadows, JRS;  Kidd, JM;  Wang, GD;  Parker, HG;  Schall, PZ;  Bianchi, M;  Christmas, MJ;  Bougiouri, K;  Buckley, RM;  Hitte, C;  Nguyen, AK;  Wang, C;  Jagannathan, V;  Niskanen, JE;  Frantz, LAF;  Arumilli, M;  Hundi, S;  Lindblad-Toh, K;  Ginja, C;  Agustina, KK;  André, C;  Boyko, AR;  Davis, BW;  Drögemüller, M;  Feng, XY;  Gkagkavouzis, K;  Iliopoulos, G;  Harris, AC;  Hytönen, M;  Kalthoff, DC;  Liu, YH;  Lymberakis, P;  Poulakakis, N;  Pires, AE;  Racimo, F;  Ramos-Almodovar, F;  Savolainen, P;  Venetsani, S;  Tammen, I;  Triantafyllidis, A;  vonHoldt, B;  Wayne, RK;  Larson, G;  Nicholas, FW;  Lohi, H;  Leeb, T;  Zhang, YP;  Ostrander, EA
Adobe PDF(4795Kb)  |  收藏  |  浏览/下载：2203/0  |  提交时间：2024/06/21
A global catalog of whole-genome diversity from 233 primate species 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 906-912
作者:  Kuderna, LFK;  Gao, H;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, PT;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(3340Kb)  |  收藏  |  浏览/下载：50/0  |  提交时间：2024/06/21
Best practices for analyzing imputed genotypes from low-pass sequencing in dogs 期刊论文
MAMMALIAN GENOME, 2022, 卷号: 33, 期号: 1, 页码: 213-229
作者:  Buckley, RM;  Harris, AC;  Wang, GD;  Whitaker, DT;  Zhang, YP;  Ostrander, EA
Adobe PDF(4940Kb)  |  收藏  |  浏览/下载：792/0  |  提交时间：2023/04/12
Variation in predicted COVID-19 risk among lemurs and lorises 期刊论文
AMERICAN JOURNAL OF PRIMATOLOGY, 2021, 卷号: 83, 期号: 6
作者:  Melin, AD;  Orkin, JD;  Janiak, MC;  Valenzuela, A;  Kuderna, L;  Marrone, F;  Ramangason, H;  Horvath, JE;  Roos, C;  Kitchener, AC;  Khor, CC;  Lim, WK;  Lee, JGH;  Tan, P;  Umapathy, G;  Raveendran, M;  Harris, RA;  Gut, I;  Gut, M;  Lizano, E;  Nadler, T;  Zinner, D;  Le, MD;  Manu, S;  Rabarivola, CJ;  Zaramody, A;  Andriaholinirina, N;  Johnson, SE;  Jarvis, ED;  Fedrigo, O;  Wu, DD;  Zhang, GJ;  Farh, KKH;  Rogers, J;  Marques-Bonet, T;  Navarro, A;  Juan, D;  Arora, PS;  Higham, JP
Adobe PDF(4849Kb)  |  收藏  |  浏览/下载：1250/0  |  提交时间：2023/04/12