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Unraveling the cryptic Bemisia tabaci species complex: Global phylogenomic analysis reveals evolutionary relationships and biogeographic patterns 期刊论文
INSECT SCI, 2025
作者:  Wang, HL;  Geng, SL;  Liu, SS;  Li, ZT;  Cameron, S;  Lei, T;  Xu, W;  Liu, Q;  Zuo, S;  Omongo, CA;  Maruthi, MN;  Mugerwa, H;  Wang, XW;  Liu, YQ;  Navas-Castillo, J;  Fiallo-Olivé, E;  Lee, KY;  Krause-Sakate, R;  Delatte, H;  Ng, J;  Seal, S;  Colvin, J
Adobe PDF(3189Kb)  |  收藏  |  浏览/下载：240/0  |  提交时间：2025/04/11
Identification of constrained sequence elements across 239 primate genomes 期刊论文
NATURE, 2024, 卷号: 625, 期号: 7996
作者:  Kuderna, LFK;  Ulirsch, JC;  Rashid, S;  Ameen, M;  Sundaram, L;  Hickey, G;  Cox, AJ;  Gao, H;  Kumar, A;  Aguet, F;  Christmas, MJ;  Clawson, H;  Haeussler, M;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rouselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, D;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Karakikes, I;  Wang, KC;  Umapathy, G;  Roos, C;  Boubli, JP;  Siepel, A;  Kundaje, A;  Paten, B;  Lindblad-Toh, K;  Rogers, J;  Bonet, TM;  Farh, KKH
Adobe PDF(11749Kb)  |  收藏  |  浏览/下载：4/0  |  提交时间：2025/04/09
The landscape of tolerated genetic variation in humans and primates 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 929+
作者:  Gao, H;  Hamp, T;  Ede, J;  Schraiber, JG;  McRae, J;  Singer-Berk, M;  Yang, YS;  Dietrich, ASD;  Fiziev, PP;  Kuderna, LFK;  Sundaram, L;  Wu, YB;  Adhikari, A;  Field, Y;  Chen, C;  Batzoglou, S;  Aguet, F;  Lemire, G;  Reimers, R;  Balick, D;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  do Amaral, JV;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Bataillon, T;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, A;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Lek, M;  Sunyaev, S;  O'Donnell-Luria, A;  Rehm, HL;  Xu, JB;  Rogers, J;  Marques-Bonet, T;  Farh, KKH
Adobe PDF(6295Kb)  |  收藏  |  浏览/下载：651/0  |  提交时间：2024/06/21
Immune resilience despite inflammatory stress promotes longevity and favorable health outcomes including resistance to infection 期刊论文
NATURE COMMUNICATIONS, 2023, 卷号: 14, 期号: 1
作者:  Ahuja, SK;  Manoharan, MS;  Lee, GC;  McKinnon, LR;  Meunier, JA;  Steri, M;  Harper, N;  Fiorillo, E;  Smith, AM;  Restrepo, MI;  Branum, AP;  Bottomley, MJ;  Orrù, V;  Jimenez, F;  Carrillo, A;  Pandranki, L;  Winter, CA;  Winter, LA;  Gaitan, AA;  Moreira, AG;  Walter, EA;  Silvestri, G;  King, CL;  Zheng, YT;  Zheng, HY;  Kimani, J;  Ball, TB;  Plummer, FA;  Fowke, KR;  Harden, PN;  Wood, KJ;  Ferris, MT;  Lund, JM;  Heise, MT;  Garrett, N;  Canady, KR;  Karim, SSA;  Little, SJ;  Gianella, S;  Smith, D;  Letendre, S;  Richman, DD;  Cucca, F;  Trinh, H;  Sanchez-Reilly, S;  Hecht, JM;  Zuluaga, JAC;  Anzueto, A;  Pugh, J;  Agan, BK;  Root-Bernstein, R;  Clark, RA;  Okulicz, JF;  He, WJ
Adobe PDF(2257Kb)  |  收藏  |  浏览/下载：85/0  |  提交时间：2024/06/21
A global catalog of whole-genome diversity from 233 primate species 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 906-912
作者:  Kuderna, LFK;  Gao, H;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, PT;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(3340Kb)  |  收藏  |  浏览/下载：11/0  |  提交时间：2024/06/21
False gene and chromosome losses in genome assemblies caused by GC content variation and repeats 期刊论文
GENOME BIOLOGY, 2022, 卷号: 23, 期号: 1
作者:  Kim, J;  Lee, C;  Ko, BJ;  Yoo, DA;  Won, S;  Phillippy, AM;  Fedrigo, O;  Zhang, GJ;  Howe, K;  Wood, J;  Durbin, R;  Formenti, G;  Brown, S;  Cantin, L;  Mello, CV;  Cho, S;  Rhie, A;  Kim, H;  Jarvis, ED
Adobe PDF(8635Kb)  |  收藏  |  浏览/下载：1152/0  |  提交时间：2023/04/12
Clinical significance of EPHX2 deregulation in prostate cancer 期刊论文
ASIAN JOURNAL OF ANDROLOGY, 2021, 卷号: 23, 期号: 1, 页码: 109-+
作者:  Liu, MS;  Zhao, H;  Xu, CX;  Xie, PB;  Wang, W;  Yang, YY;  Lee, WH;  Jin, Y;  Zhou, HQ
Adobe PDF(1894Kb)  |  收藏  |  浏览/下载：2290/0  |  提交时间：2023/04/18
A novel peptide identified from skin secretions of Bombina maxima possesses LPS-neutralizing activity 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2021, 卷号: 550, 页码: 107-112
作者:  Guo, CF;  Li, J;  Lee, WH;  Li, H;  Shen, JH;  Zhang, BY
Adobe PDF(909Kb)  |  收藏  |  浏览/下载：2015/0  |  提交时间：2023/04/18
Towards complete and error-free genome assemblies of all vertebrate species 期刊论文
NATURE, 2021, 卷号: 592, 期号: 7856, 页码: 737-+
作者:  Rhie, A;  McCarthy, SA;  Fedrigo, O;  Damas, J;  Formenti, G;  Koren, S;  Uliano-Silva, M;  Chow, W;  Fungtammasan, A;  Kim, J;  Lee, C;  Ko, BJ;  Chaisson, M;  Gedman, GL;  Cantin, LJ;  Thibaud-Nissen, F;  Haggerty, L;  Bista, I;  Smith, M;  Haase, B;  Mountcastle, J;  Winkler, S;  Paez, S;  Howard, J;  Vernes, SC;  Lama, TM;  Grutzner, F;  Warren, WC;  Balakrishnan, CN;  Burt, D;  George, JM;  Biegler, MT;  Iorns, D;  Digby, A;  Eason, D;  Robertson, B;  Edwards, T;  Wilkinson, M;  Turner, G;  Meyer, A;  Kautt, AF;  Franchini, P;  Detrich, HW;  Svardal, H;  Wagner, M;  Naylor, GJP;  Pippel, M;  Malinsky, M;  Mooney, M;  Simbirsky, M;  Hannigan, BT;  Pesout, T;  Houck, M;  Misuraca, A;  Kingan, SB;  Hall, R;  Kronenberg, Z;  Sovi, I;  Dunn, C;  Ning, Z;  Hastie, A;  Lee, J;  Selvaraj, S;  Green, RE;  Putnam, NH;  Gut, I;  Ghurye, J;  Garrison, E;  Sims, Y;  Collins, J;  Pelan, S;  Torrance, J;  Tracey, A;  Wood, J;  Dagnew, RE;  Guan, D;  London, SE;  Clayton, DF;  Mello, CV;  Friedrich, SR;  Lovell, PV;  Osipova, E;  Al-Ajli, FO;  Secomandi, S;  Kim, H;  Theofanopoulou, C;  Hiller, M;  Zhou, Y;  Harris, RS;  Makova, KD;  Medvedev, P;  Hoffman, J;  Masterson, P;  Clark, K;  Martin, F;  Howe, K;  Flicek, P;  Walenz, BP;  Kwak, W;  Clawson, H;  Diekhans, M;  Nassar, L;  Paten, B;  Kraus, RHS;  Crawford, AJ;  Gilbert, MTP;  Zhang, G;  Venkatesh, B;  Murphy, RW;  Koepfli, KP;  Shapiro, B;  Johnson, WE;  Di Palma, F;  Marques-Bonet, T;  Teeling, EC;  Warnow, T;  Graves, JM;  Ryder, OA;  Haussler, D;  O'Brien, SJ;  Korlach, J;  Lewin, HA;  Howe, K;  Myers, EW;  Durbin, R;  Phillippy, AM;  Jarvis, ED
Adobe PDF(23042Kb)  |  收藏  |  浏览/下载：38/0  |  提交时间：2023/04/12
Variation in predicted COVID-19 risk among lemurs and lorises 期刊论文
AMERICAN JOURNAL OF PRIMATOLOGY, 2021, 卷号: 83, 期号: 6
作者:  Melin, AD;  Orkin, JD;  Janiak, MC;  Valenzuela, A;  Kuderna, L;  Marrone, F;  Ramangason, H;  Horvath, JE;  Roos, C;  Kitchener, AC;  Khor, CC;  Lim, WK;  Lee, JGH;  Tan, P;  Umapathy, G;  Raveendran, M;  Harris, RA;  Gut, I;  Gut, M;  Lizano, E;  Nadler, T;  Zinner, D;  Le, MD;  Manu, S;  Rabarivola, CJ;  Zaramody, A;  Andriaholinirina, N;  Johnson, SE;  Jarvis, ED;  Fedrigo, O;  Wu, DD;  Zhang, GJ;  Farh, KKH;  Rogers, J;  Marques-Bonet, T;  Navarro, A;  Juan, D;  Arora, PS;  Higham, JP
Adobe PDF(4849Kb)  |  收藏  |  浏览/下载：1227/0  |  提交时间：2023/04/12