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Identification of constrained sequence elements across 239 primate genomes 期刊论文
NATURE, 2024, 卷号: 625, 期号: 7996
作者:  Kuderna, LFK;  Ulirsch, JC;  Rashid, S;  Ameen, M;  Sundaram, L;  Hickey, G;  Cox, AJ;  Gao, H;  Kumar, A;  Aguet, F;  Christmas, MJ;  Clawson, H;  Haeussler, M;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rouselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, D;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Karakikes, I;  Wang, KC;  Umapathy, G;  Roos, C;  Boubli, JP;  Siepel, A;  Kundaje, A;  Paten, B;  Lindblad-Toh, K;  Rogers, J;  Bonet, TM;  Farh, KKH
Adobe PDF(11749Kb)  |  收藏  |  浏览/下载：4/0  |  提交时间：2025/04/09
Ecological and anthropogenic effects on the genomic diversity of lemurs in Madagascar 期刊论文
NATURE ECOLOGY & EVOLUTION, 2024, 卷号: 9, 期号: 1
作者:  Orkin, JD;  Kuderna, LFK;  Hermosilla-Albala, N;  Fontsere, C;  Aylward, ML;  Janiak, MC;  Andriaholinirina, N;  Balaresque, P;  Blair, ME;  Fausser, JL;  Gut, IG;  Gut, M;  Hahn, MW;  Harris, RA;  Horvath, JE;  Keyser, C;  Kitchener, AC;  Le, MD;  Lizano, E;  Merker, S;  Nadler, T;  Perry, GH;  Rabarivola, CJ;  Rasmussen, L;  Raveendran, M;  Roos, C;  Wu, DD;  Zaramody, A;  Zhang, GJ;  Zinner, D;  Pozzi, L;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(4976Kb)  |  收藏  |  浏览/下载：1/0  |  提交时间：2025/04/09
Airborne DNA reveals predictable spatial and seasonal dynamics of fungi 期刊论文
NATURE, 2024, 卷号: 631, 期号: 8022, 页码: 835-+
作者:  Abrego, N;  Furneaux, B;  Hardwick, B;  Somervuo, P;  Palorinne, I;  Aguilar-Trigueros, CA;  Andrew, NR;  Babiy, UV;  Bao, T;  Bazzano, G;  Bondarchuk, SN;  Bonebrake, TC;  Brennan, GL;  Bret-Harte, S;  Bässler, C;  Cagnolo, L;  Cameron, EK;  Chapurlat, E;  Creer, S;  D'Acqui, LP;  de Vere, N;  Desprez-Loustau, ML;  Dongmo, MAK;  Jacobsen, IBD;  Fisher, BL;  de Jesus, MF;  Gilbert, GS;  Griffith, GW;  Gritsuk, AA;  Gross, A;  Grudd, H;  Halme, P;  Hanna, R;  Hansen, J;  Hansen, LH;  Hegbe, ADMT;  Hill, S;  Hogg, ID;  Hultman, J;  Hyde, KD;  Hynson, NA;  Ivanova, N;  Karisto, P;  Kerdraon, D;  Knorre, A;  Krisai-Greilhuber, I;  Kurhinen, J;  Kuzmina, M;  Lecomte, N;  Lecomte, E;  Loaiza, V;  Lundin, E;  Meire, A;  Mesic, A;  Miettinen, O;  Monkhouse, N;  Mortimer, P;  Müller, J;  Nilsson, RH;  Nonti, PYC;  Nordén, J;  Norden, B;  Norros, V;  Paz, C;  Pellikka, P;  Pereira, D;  Petch, G;  Pitkänen, JM;  Popa, F;  Potter, C;  Purhonen, J;  Pätsi, S;  Rafiq, A;  Raharinjanahary, D;  Rakos, N;  Rathnayaka, AR;  Raundrup, K;  Rebriev, YA;  Rikkinen, J;  Rogers, HMK;  Rogovsky, A;  Rozhkov, Y;  Runnel, K;  Saarto, A;  Savchenko, A;  Schlegel, M;  Schmidt, NM;  Seibold, S;  Skjoth, C;  Stengel, E;  Sutyrina, SV;  Syvänperä, I;  Tedersoo, L;  Timm, J;  Tipton, L;  Toju, H;  Uscka-Perzanowska, M;  Van der Bank, M;  Van der Bank, FH;  Vandenbrink, B;  Ventura, S;  Vignisson, SR;  Wang, X;  Weisser, WW;  Wijesinghe, SN;  Wright, SJ;  Yang, C;  Yorou, NS;  Young, A;  Yu, DW;  Zakharov, EV;  Hebert, PDN;  Roslin, T;  Ovaskainen, O
Adobe PDF(11889Kb)  |  收藏  |  浏览/下载：41/0  |  提交时间：2025/04/21
Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA 期刊论文
SCI DATA, 2024, 卷号: 11, 期号: 1
作者:  Ovaskainen, O;  Abrego, N;  Furneaux, B;  Hardwick, B;  Somervuo, P;  Palorinne, I;  Andrew, NR;  Babiy, UV;  Bao, T;  Bazzano, G;  Bondarchuk, SN;  Bonebrake, TC;  Brennan, GL;  Bret-Harte, S;  Bässler, C;  Cagnolo, L;  Cameron, EK;  Chapurlat, E;  Creer, S;  D'Acqui, LP;  de Vere, N;  Desprez-Loustau, ML;  Dongmo, MAK;  Jacobsen, IBD;  Fisher, BL;  de Jesus, MF;  Gilbert, GS;  Griffith, GW;  Gritsuk, AA;  Gross, A;  Grudd, H;  Halme, P;  Hanna, R;  Hansen, J;  Hansen, LH;  Hegbe, ADMT;  Hill, S;  Hogg, ID;  Hultman, J;  Hyde, KD;  Hynson, NA;  Ivanova, N;  Karisto, P;  Kerdraon, D;  Knorre, A;  Krisai-Greilhuber, I;  Kurhinen, J;  Kuzmina, M;  Lecomte, N;  Lecomte, E;  Loaiza, V;  Lundin, E;  Meire, A;  Mesic, A;  Miettinen, O;  Monkhause, N;  Mortimer, P;  Müller, J;  Nilsson, RH;  Nonti, PYC;  Nordén, J;  Nordén, B;  Paz, C;  Pellikka, P;  Pereira, D;  Petch, G;  Pitkänen, JM;  Popa, F;  Potter, C;  Purhonen, J;  Pätsi, S;  Rafiq, A;  Raharinjanahary, D;  Rakos, N;  Rathnayaka, AR;  Raundrup, K;  Rebriev, YA;  Rikkinen, J;  Rogers, HMK;  Rogovsky, A;  Rozhkov, Y;  Runnel, K;  Saarto, A;  Savchenko, A;  Schlegel, M;  Schmidt, NM;  Seibold, S;  Skjoth, C;  Stengel, E;  Sutyrina, SV;  Syvänperä, I;  Tedersoo, L;  Timm, J;  Tipton, L;  Toju, H;  Uscka-Perzanowska, M;  van der Bank, M;  van der Bank, FH;  Vandenbrink, B;  Ventura, S;  Vignisson, SR;  Wang, XY;  Weisser, WW;  Wijesinghe, SN;  Wright, SJ;  Yang, CY;  Yorou, NS;  Young, A;  Yu, DW;  Zakharov, EV;  Hebert, PDN;  Roslin, T
Adobe PDF(1918Kb)  |  收藏  |  浏览/下载：34/0  |  提交时间：2025/04/21
Phylogenomic analyses provide insights into primate evolution 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 913-924
作者:  Shao, Y;  Zhou, L;  Li, F;  Zhao, L;  Zhang, BL;  Shao, F;  Chen, JW;  Chen, CY;  Bi, XP;  Zhuang, XL;  Zhu, HL;  Hu, J;  Sun, ZY;  Li, X;  Wang, DP;  Rivas-González, I;  Wang, S;  Wang, YM;  Chen, W;  Li, G;  Lu, HM;  Liu, Y;  Kuderna, LFK;  Farh, KKH;  Fan, PF;  Yu, L;  Li, M;  Liu, ZJ;  Tiley, GP;  Yoder, AD;  Roos, C;  Hayakawa, T;  Marques-Bonet, T;  Rogers, J;  Stenson, PD;  Cooper, DN;  Schierup, MH;  Yao, YG;  Zhang, YP;  Wang, W;  Qi, XG;  Zhang, GJ;  Wu, DD
Adobe PDF(6290Kb)  |  收藏  |  浏览/下载：183/0  |  提交时间：2024/06/21
The landscape of tolerated genetic variation in humans and primates 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 929+
作者:  Gao, H;  Hamp, T;  Ede, J;  Schraiber, JG;  McRae, J;  Singer-Berk, M;  Yang, YS;  Dietrich, ASD;  Fiziev, PP;  Kuderna, LFK;  Sundaram, L;  Wu, YB;  Adhikari, A;  Field, Y;  Chen, C;  Batzoglou, S;  Aguet, F;  Lemire, G;  Reimers, R;  Balick, D;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  do Amaral, JV;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Bataillon, T;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, A;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Lek, M;  Sunyaev, S;  O'Donnell-Luria, A;  Rehm, HL;  Xu, JB;  Rogers, J;  Marques-Bonet, T;  Farh, KKH
Adobe PDF(6295Kb)  |  收藏  |  浏览/下载：651/0  |  提交时间：2024/06/21
A global catalog of whole-genome diversity from 233 primate species 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 906-912
作者:  Kuderna, LFK;  Gao, H;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, PT;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(3340Kb)  |  收藏  |  浏览/下载：9/0  |  提交时间：2024/06/21
Initiation of the Primate Genome Project 期刊论文
ZOOLOGICAL RESEARCH, 2022, 卷号: 43, 期号: 2, 页码: 147-149
作者:  Wu, DD;  Qi, XG;  Yu, L;  Li, M;  Liu, ZJ;  Yoder, AD;  Roos, C;  Hayakawa, T;  Rogers, J;  Marques-Bonet, T;  Su, B;  Yao, YG;  Zhang, YP;  Zhang, GJ
Adobe PDF(958Kb)  |  收藏  |  浏览/下载：131/0  |  提交时间：2023/04/12
The Strepsirrhine and Tarsier Genome Sequencing Initiative: Conservation Genomics of the Non-Anthropoid Primates 期刊论文
AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, 2021, 卷号: 174, 页码: 79-79
作者:  Orkin, JD;  Kuderna, LFK;  Gut, M;  Gut, I;  Horvath, J;  Janiak, MC;  Merker, S;  Kitchener, A;  Pozzi, L;  Zhang, GJ;  Roos, C;  Rogers, J;  Farh, KKH;  Marques-Bonet, T
Adobe PDF(1073Kb)  |  收藏  |  浏览/下载：115/0  |  提交时间：2023/04/12
Variation in predicted COVID-19 risk among lemurs and lorises 期刊论文
AMERICAN JOURNAL OF PRIMATOLOGY, 2021, 卷号: 83, 期号: 6
作者:  Melin, AD;  Orkin, JD;  Janiak, MC;  Valenzuela, A;  Kuderna, L;  Marrone, F;  Ramangason, H;  Horvath, JE;  Roos, C;  Kitchener, AC;  Khor, CC;  Lim, WK;  Lee, JGH;  Tan, P;  Umapathy, G;  Raveendran, M;  Harris, RA;  Gut, I;  Gut, M;  Lizano, E;  Nadler, T;  Zinner, D;  Le, MD;  Manu, S;  Rabarivola, CJ;  Zaramody, A;  Andriaholinirina, N;  Johnson, SE;  Jarvis, ED;  Fedrigo, O;  Wu, DD;  Zhang, GJ;  Farh, KKH;  Rogers, J;  Marques-Bonet, T;  Navarro, A;  Juan, D;  Arora, PS;  Higham, JP
Adobe PDF(4849Kb)  |  收藏  |  浏览/下载：1227/0  |  提交时间：2023/04/12