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Identification of constrained sequence elements across 239 primate genomes 期刊论文
NATURE, 2024, 卷号: 625, 期号: 7996
作者:  Kuderna, LFK;  Ulirsch, JC;  Rashid, S;  Ameen, M;  Sundaram, L;  Hickey, G;  Cox, AJ;  Gao, H;  Kumar, A;  Aguet, F;  Christmas, MJ;  Clawson, H;  Haeussler, M;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rouselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, D;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Karakikes, I;  Wang, KC;  Umapathy, G;  Roos, C;  Boubli, JP;  Siepel, A;  Kundaje, A;  Paten, B;  Lindblad-Toh, K;  Rogers, J;  Bonet, TM;  Farh, KKH
Adobe PDF(11749Kb)  |  收藏  |  浏览/下载：20/0  |  提交时间：2025/04/09
Eighty million years of rapid evolution of the primate Y chromosome 期刊论文
NATURE ECOLOGY & EVOLUTION, 2023, 卷号: 7, 期号: 7, 页码: 1114-1130
作者:  Zhou, Y;  Zhan, XY;  Jin, JZ;  Zhou, L;  Bergman, J;  Li, XM;  Rousselle, MMC;  Belles, MR;  Zhao, L;  Fang, MQ;  Chen, JW;  Fang, Q;  Kuderna, L;  Marques-Bonet, T;  Kitayama, H;  Hayakawa, T;  Yao, YG;  Yang, HM;  Cooper, DN;  Qi, XG;  Wu, DD;  Schierup, MH;  Zhang, GJ
Adobe PDF(4052Kb)  |  收藏  |  浏览/下载：1767/0  |  提交时间：2024/06/21
Phylogenomic analyses provide insights into primate evolution 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 913-924
作者:  Shao, Y;  Zhou, L;  Li, F;  Zhao, L;  Zhang, BL;  Shao, F;  Chen, JW;  Chen, CY;  Bi, XP;  Zhuang, XL;  Zhu, HL;  Hu, J;  Sun, ZY;  Li, X;  Wang, DP;  Rivas-González, I;  Wang, S;  Wang, YM;  Chen, W;  Li, G;  Lu, HM;  Liu, Y;  Kuderna, LFK;  Farh, KKH;  Fan, PF;  Yu, L;  Li, M;  Liu, ZJ;  Tiley, GP;  Yoder, AD;  Roos, C;  Hayakawa, T;  Marques-Bonet, T;  Rogers, J;  Stenson, PD;  Cooper, DN;  Schierup, MH;  Yao, YG;  Zhang, YP;  Wang, W;  Qi, XG;  Zhang, GJ;  Wu, DD
Adobe PDF(6290Kb)  |  收藏  |  浏览/下载：1530/0  |  提交时间：2024/06/21
Evolution of the germline mutation rate across vertebrates 期刊论文
NATURE, 2023, 卷号: 615, 期号: 7951, 页码: 285+
作者:  Bergeron, LA;  Besenbacher, S;  Zheng, J;  Li, PY;  Bertelsen, MF;  Quintard, B;  Hoffman, JI;  Li, ZP;  Leger, JS;  Shao, CW;  Stiller, J;  Gilbert, MTP;  Schierup, MH;  Zhang, GJ
Adobe PDF(4504Kb)  |  收藏  |  浏览/下载：777/0  |  提交时间：2024/06/21
Pervasive incomplete lineage sorting illuminates speciation and selection in primates 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 925+
作者:  Rivas-González, I;  Rousselle, M;  Li, F;  Zhou, L;  Dutheil, JY;  Munch, K;  Shao, Y;  Wu, DD;  Schierup, MH;  Zhang, GJ
Adobe PDF(1898Kb)  |  收藏  |  浏览/下载：715/0  |  提交时间：2024/06/21
The landscape of tolerated genetic variation in humans and primates 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 929+
作者:  Gao, H;  Hamp, T;  Ede, J;  Schraiber, JG;  McRae, J;  Singer-Berk, M;  Yang, YS;  Dietrich, ASD;  Fiziev, PP;  Kuderna, LFK;  Sundaram, L;  Wu, YB;  Adhikari, A;  Field, Y;  Chen, C;  Batzoglou, S;  Aguet, F;  Lemire, G;  Reimers, R;  Balick, D;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  do Amaral, JV;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Bataillon, T;  Nadler, T;  Khor, CC;  Lee, J;  Tan, P;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, A;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Lek, M;  Sunyaev, S;  O'Donnell-Luria, A;  Rehm, HL;  Xu, JB;  Rogers, J;  Marques-Bonet, T;  Farh, KKH
Adobe PDF(6295Kb)  |  收藏  |  浏览/下载：687/0  |  提交时间：2024/06/21
Comparative genomics reveals the hybrid origin of a macaque group 期刊论文
SCIENCE ADVANCES, 2023, 卷号: 9, 期号: 22
作者:  Zhang, BL;  Chen, W;  Wang, ZF;  Pang, W;  Luo, MT;  Wang, S;  Shao, Y;  He, WQ;  Deng, Y;  Zhou, L;  Chen, JW;  Yang, MM;  Wu, YJ;  Wang, L;  Fernández-Bellon, H;  Molloy, S;  Meunler, H;  Wanert, F;  Kuderna, L;  Marques-Bonet, T;  Roos, C;  Qi, XG;  Li, M;  Liu, ZJ;  Schierup, MH;  Cooper, DN;  Liu, JQ;  Zheng, YT;  Zhang, GJ;  Wu, DD
Adobe PDF(1439Kb)  |  收藏  |  浏览/下载：169/0  |  提交时间：2024/06/21
A global catalog of whole-genome diversity from 233 primate species 期刊论文
SCIENCE, 2023, 卷号: 380, 期号: 6648, 页码: 906-912
作者:  Kuderna, LFK;  Gao, H;  Janiak, MC;  Kuhlwilm, M;  Orkin, JD;  Bataillon, T;  Manu, S;  Valenzuela, A;  Bergman, J;  Rousselle, M;  Silva, FE;  Agueda, L;  Blanc, J;  Gut, M;  de Vries, D;  Goodhead, I;  Harris, RA;  Raveendran, M;  Jensen, A;  Chuma, IS;  Horvath, JE;  Hvilsom, C;  Juan, DV;  Frandsen, P;  Schraiber, JG;  de Melo, FR;  Bertuol, F;  Byrne, H;  Sampaio, I;  Farias, I;  Valsecchi, J;  Messias, M;  da Silva, MNF;  Trivedi, M;  Rossi, R;  Hrbek, T;  Andriaholinirina, N;  Rabarivola, CJ;  Zaramody, A;  Jolly, CJ;  Phillips-Conroy, J;  Wilkerson, G;  Abee, C;  Simmons, JH;  Fernandez-Duque, E;  Kanthaswamy, S;  Shiferaw, F;  Wu, DD;  Zhou, L;  Shao, Y;  Zhang, GJ;  Keyyu, JD;  Knauf, S;  Le, MD;  Lizano, E;  Merker, S;  Navarro, A;  Nadler, T;  Khor, CC;  Lee, J;  Tan, PT;  Lim, WK;  Kitchener, AC;  Zinner, D;  Gut, I;  Melin, AD;  Guschanski, K;  Schierup, MH;  Beck, RMD;  Umapathy, G;  Roos, C;  Boubli, JP;  Rogers, J;  Farh, KKH;  Bonet, TM
Adobe PDF(3340Kb)  |  收藏  |  浏览/下载：42/0  |  提交时间：2024/06/21
Incomplete lineage sorting and phenotypic evolution in marsupials 期刊论文
CELL, 2022, 卷号: 185, 期号: 10, 页码: 1646-+
作者:  Feng, SH;  Bai, M;  Rivas-Gonzalez, I;  Li, C;  Liu, SP;  Tong, YJ;  Yang, HD;  Chen, GJ;  Xie, D;  Sears, KE;  Franco, LM;  Gaitan-Espitia, JD;  Nespolo, RF;  Johnson, WE;  Yang, HM;  Brandies, PA;  Hogg, CJ;  Belov, K;  Renfree, MB;  Helgen, KM;  Boomsma, JJ;  Schierup, MH;  Zhang, GJ
Adobe PDF(4447Kb)  |  收藏  |  浏览/下载：1418/0  |  提交时间：2023/04/12
The germline mutational process in rhesus macaque and its implications for phylogenetic dating 期刊论文
GIGASCIENCE, 2021, 卷号: 10, 期号: 5
作者:  Bergeron, LA;  Besenbacher, S;  Bakker, J;  Zheng, J;  Li, PY;  Pacheco, G;  Sinding, MHS;  Kamilari, M;  Gilbert, MTP;  Schierup, MH;  Zhang, GJ
Adobe PDF(2195Kb)  |  收藏  |  浏览/下载：50/0  |  提交时间：2023/04/12